Summary of Galaxy Mass Spectrometry October 15th meeting.
1) Metabolomics researchers - please respond to Doodle survey for a bi-monthly meeting: https://doodle.com/poll/rbemey7afzznf37g#calendar
2) Vijay Nagampalli (Blankenberg Lab) presented on Mass Spectrometry research tools needs.
3) Next Galaxy meetings –
a) Proteomics 26th November 2020 and January 7th 2021 at 1 PM GMT
b) Mass Spectrometry February 18th, 2021 at 1 PM GMT.
4) Details of prior meetings at: http://z.umn.edu/celestialmasses
Copy of Email that was send to the new Galaxy metabolomics mailing list:
Dear Galaxy Metabolomics researchers,
Thank you for joining the call today.
We created a new google drive folder: https://drive.google.com/drive/folders/1aZWbLDluwZo65owthJ4yMWiHlnoooqv1
in which you’ll find two subfolders. The meeting notes and slides of today are in the “call” folder and the other folder “Minisymposium” contains a document for the planned Minisymposium.
In case you missed today’s call, feel free to sign in your name, interests and needs into the “profile” section of the meeting notes document.
We agreed on holding a Minisymposium in January/February at European morning times (9 am to 12pm) to get to know each other better and give everyone a chance to present their research.
Everyone interested in joining the Minisymposium please fill in your availability in the doodle link until 18th December:
Please also fill in your details into the spreadsheet until 18th December for joining (don’t fill in column with talk title) and presenting (fill in talk title in column) at the Minisymposium: https://docs.google.com/spreadsheets/d/1PiWVL_V01n6jNEkFC5roWFDxIBffZ3FUnvCV3sFGpeE/edit?usp=sharing
Please feel free to share all the content with interested colleagues and invite them to join or present at the Minisymposium.
Melanie & Bea
The IWC (Intergalactic Workflow Commission) has recently made some progress:
IWC would be happy about submissions of workflows. So if you have finished workflows open a PR over here: https://github.com/galaxyproject/iwc
I's time for another Galaxy metabolomics call. Please join us on May 6, 2 pm CET via the zoom https://us02web.zoom.us/j/83058868819?pwd=djB0RWtwSXUzZjJvbk5wcGJoWktTUT09
Meeting ID: 830 5886 8819
We'll have a guest speaker: Amrita Cheema, Georgetown University School of Medicine in Washington DC will present "Radiometabolomics: Identification of Metabolic Predictors of Radiation Late Effects". Amrita is involved in the ABRF Metabolomics Research Group (https://www.abrf.org/metabolomics-mrg- ) and I hope we can discuss with her also about training and standardization in metabolomics.
Topic: Metabolomics call
Time: Sep 9, 2021 02:00 PM Amsterdam, Berlin, Rome, Stockholm, Vienna
Meeting ID: 851 6952 3832
please find below the Zoom details for the next Galaxy metabolomics call on November 24 at 2pm CET.
Matthias Bernt from Helmholtz-Centre for Environmental Research in Leipzig will speak about "Continuous integration on Galaxy tool repositories", which is not directly metabolomics related but gives ideas about how we can organize the multitude of Galaxy metabolomics tools properly. Afterwards we also have time for general updates.
Meeting ID: 845 9445 0688
I am looking forward to seeing you on Thursday.