Hi all,
I was just installing vencopy in a new venv, when I got the following error message:
ERROR: Command errored out with exit status 1:
command: /Users/moritzwitting/python_env/vencopy/bin/python3.7 /Users/moritzwitting/python_env/vencopy/lib/python3.7/site-packages/pip/_vendor/pep517/_in_process.py prepare_metadata_for_build_wheel /var/folders/3q/qrzp42h10lv4fhdkzbf3swlw0000gr/T/tmpko44smoa
cwd: /private/var/folders/3q/qrzp42h10lv4fhdkzbf3swlw0000gr/T/pip-install-p3ipvg5n/scipy
Complete output (214 lines):
Running scipy/linalg/_generate_pyx.py
Running scipy/special/_generate_pyx.py
Running scipy/stats/_generate_pyx.py
Processing scipy/cluster/_vq.pyx
Processing scipy/cluster/_optimal_leaf_ordering.pyx
Processing scipy/cluster/_hierarchy.pyx
Processing scipy/ndimage/src/_cytest.pyx
Processing scipy/ndimage/src/_ni_label.pyx
Processing scipy/linalg/cython_lapack.pyx
Processing scipy/linalg/_matfuncs_sqrtm_triu.pyx
Processing scipy/linalg/_solve_toeplitz.pyx
Processing scipy/linalg/cython_blas.pyx
Processing scipy/linalg/_decomp_update.pyx.in
Processing scipy/optimize/_group_columns.pyx
Processing scipy/optimize/_bglu_dense.pyx
Processing scipy/optimize/_trlib/_trlib.pyx
Processing scipy/optimize/_highs/cython/src/_highs_constants.pyx
Processing scipy/optimize/_highs/cython/src/_highs_wrapper.pyx
Processing scipy/optimize/_lsq/givens_elimination.pyx
Processing scipy/optimize/cython_optimize/_zeros.pyx.in
Processing scipy/io/matlab/mio_utils.pyx
Processing scipy/io/matlab/streams.pyx
Processing scipy/io/matlab/mio5_utils.pyx
Processing scipy/_lib/_ccallback_c.pyx
Processing scipy/_lib/_test_deprecation_def.pyx
Processing scipy/_lib/_test_deprecation_call.pyx
Processing scipy/_lib/messagestream.pyx
Processing scipy/special/_ufuncs_cxx.pyx
Processing scipy/special/cython_special.pyx
Processing scipy/special/_ellip_harm_2.pyx
Processing scipy/special/_comb.pyx
Processing scipy/special/_test_round.pyx
Processing scipy/special/_ufuncs.pyx
Processing scipy/fftpack/convolve.pyx
Processing scipy/interpolate/interpnd.pyx
Processing scipy/interpolate/_bspl.pyx
Processing scipy/interpolate/_ppoly.pyx
Processing scipy/sparse/_csparsetools.pyx.in
warning: _cython_special_custom.pxi:9:8: Unreachable code
warning: _cython_special_custom.pxi:13:4: Unreachable code
warning: _cython_special_custom.pxi:21:8: Unreachable code
warning: _cython_special_custom.pxi:25:4: Unreachable code
warning: _cython_special_custom.pxi:33:8: Unreachable code
warning: _cython_special_custom.pxi:37:4: Unreachable code
warning: _cython_special_custom.pxi:45:8: Unreachable code
warning: _cython_special_custom.pxi:49:4: Unreachable code
Processing scipy/sparse/csgraph/_shortest_path.pyx
Processing scipy/sparse/csgraph/_traversal.pyx
Processing scipy/sparse/csgraph/_flow.pyx
Processing scipy/sparse/csgraph/_tools.pyx
Processing scipy/sparse/csgraph/_matching.pyx
Processing scipy/sparse/csgraph/_reordering.pyx
Processing scipy/sparse/csgraph/_min_spanning_tree.pyx
Processing scipy/spatial/ckdtree.pyx
Processing scipy/spatial/_voronoi.pyx
Processing scipy/spatial/_hausdorff.pyx
Processing scipy/spatial/qhull.pyx
Processing scipy/spatial/transform/rotation.pyx
Processing scipy/signal/_max_len_seq_inner.pyx
Processing scipy/signal/_peak_finding_utils.pyx
Processing scipy/signal/_upfirdn_apply.pyx
Processing scipy/signal/_spectral.pyx
Processing scipy/signal/_sosfilt.pyx
Processing scipy/stats/_stats.pyx
Processing scipy/stats/_qmc_cy.pyx
Processing scipy/stats/_sobol.pyx
Processing scipy/stats/biasedurn.pyx
Processing scipy/stats/_boost/src/beta_ufunc.pyx
Processing scipy/stats/_boost/src/nbinom_ufunc.pyx
Processing scipy/stats/_boost/src/binom_ufunc.pyx
Cythonizing sources
lapack_opt_info:
lapack_mkl_info:
customize UnixCCompiler
libraries mkl_
I am using Python 3.7.12
Hi Moritz, sorry to read you're experiencing difficulties. Whats your platform and which commands did you run? The error message tells me that this problem is rather scipy related than vencopy related. Could you try to set up a new environment with
conda env create -n [someName] python=3.9
then activate it and
pip install vencopy
?
Hello vencopy folk, I believe I have set up my environment correctly. Just a couple of hopefully minor error messages concerning jupyterlab. As follow:
191769 pip install vencopy
ERROR: jupyterlab-pygments 0.1.2 has requirement pygments<3,>=2.4.1, but you'll have pygments 2.3.1 which is incompatible.
ERROR: nbconvert 6.3.0 has requirement pygments>=2.4.1, but you'll have pygments 2.3.1 which is incompatible.And:
191775 jupyter-lab
[W 2021-11-16 13:42:50.844 LabApp] Could not determine jupyterlab build status without nodejs
191782 nodejs --version
v10.19.0
See you at 15:00 ..
I don't have access to the data from here https://daten.clearingstelle-verkehr.de/order-form.html - the packages cost money. Is there a way to test vencopy without having access to this data?